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2017

 

Neha Agrawal, Chandrika Bhattacharyya, Ankur Mukherjee, Ubaid Ullah, Bhaswati Pandit, Kanury V. S. Rao, Partha P. Majumder;Dissecting host factors that regulate the early stages of tuberculosis infection; Tuberculosis; 2016

Mandal P, Bhattacharjee B, Sen S, Bhattacharya A, Roy Chowdhury R, Mondal N R, and Sengupta S; Complete genome sequences of eight Human Papillomavirus type 16 Asian American and European variant isolates from cervical biopsies and lesions in Indian women; Genome Announcements; 2016, 4(3) e00243-16

Samanwoy Mukhopadhyay, Abhay D Pandey, Samsiddhi Bhattacharjee, Saroj K Mohapatra; Pathway-level meta-analysis reveals transcriptional signature of septic shock; Critical Care;2016, 20(Suppl 1):P7

Pandey P, Acharya M; Disease-Phenotype Deconvolution in Genetic Eye Diseases Using Online Mendelian Inheritance in Man; Invest Ophthalmol Vis Sci.; 2016, May 1;57(6):2567-76. doi: 10.1167/iovs.15-18057

Chinnaswamy S; Gene-disease association with human IFNL locus polymorphisms extends beyond hepatitis C virus infections; Genes and Immunity; 2016, in press; DOI: 10.1038/gene.2016.24

Chinnaswamy S, Bhushan A, Behera AK, Ghosh S, Rampurkar V, Chandra V et al; Roles for transcription factors Sp1, NF-ĸB, IRF3, and IRF7 in expression of the human IFNL4 gene; Viral Immunology; 2016, 29: 49-63

Vishal M, Sharma A, Kaurani L, Alfano G, Mookherjee S, Narta K, Agrawal J, Bhattacharya I, Roychoudhury S, Ray J, Waseem N, Bhattacharya S, Basu A, Sen A, Ray K, Mukhopadhyay A; Genetic association and stress mediated down regulation in trabecular meshwork implicates MPP7 as a novel candidate gene in primary open angle glaucoma; BMC Medical Genomics; 2016, 9(1):15

Basu A, Sarkar-Roy N, Majumder PP; Genomic reconstruction of the history of extant populations of India reveals five distinct ancestral components and a complex structure; Proceedings of the National Academy of Sciences, U S A; 2016, 113(6):1594-9

Chakraborty S and Datta, S; A covariate adjusted Mann‐Whitney test for comparing two sojourn times under right censoring; In Proceedings of the conference ISNPS2014, (Wenceslao González Manteiga, Juan Romo, Ricardo Cao, eds.),  Springer, New York, USA; 2016

Neelanjana Roy, DebanjaliDasgupta, IndranilMukhopadhyay, AnkitaChatterjee, Kausik Das, PradipBhowmik, Soumyajit Das, PriyadarshiBasu, Amal K. Santra, SimantiDatta, Gopal Krishna Dhali, AbhijitChowdhury, and Soma Banerjee; Genetic Association and Gene-Gene Interaction Reveal Genetic Variations in ADH1B, GSTM1 and MnSOD Independently Confer Risk to Alcoholic Liver Diseases in India; PLoS One; 2016, 11(3): e0149843

Chakraborty, A., Chakraborty S., Jala, V. R., Thomas, J. M., Sharp, M. K and Haribabu, B; Impact of Bi-Axial Shear on Atherogenic Gene Expression by Endothelial Cells; Annals of Biomedical Engineering; 2016, doi:10.1007/s10439-016-1626-2

Ghosh A, Ghosh A, Datta S, Dasgupta D, Das S, Ray S, Gupta S, Datta S, Chowdhury A, Chatterjee R, Mohapatra S K, Banerjee S; Hepatic miR-126 is a Potential Plasma Biomarker for Detection of Hepatitis B Virus Infected Hepatocellular Carcinoma; Int J Cancer; 2016; Jan 12. doi: 10.1002/ijc.29999

Jayashree S, Arindam M, Vijay KV; Genetic epidemiology of coronary artery disease: an Asian Indian perspective; J Genet; 2015, Sep;94(3)25: 28-33

Datta S, Ray A, Singh R, Mondal P, Basu A, De Sarkar N, Majumder M, Maiti G, Baral A, Jha GN, Mukhopadhyay I, Panda C, Chowdhury S, Ghosh S, Roychoudhury S, Roy B; Sequence and expression variations in 23 genes involved in mitochondrial and non-mitochondrial apoptotic pathways and risk of oral leukoplakia and cancer; Mitochondrion; 2015, 25: 28-33

Renzette, N., Pokalyuk, C., Gibson, L., Bhattacharjee B., Schleiss, M. R., Hamprecht, K.,Yamamoto, A. Y. Mussi-Pinhata, M. M., Britt, W. J.,  Jensen, J. D.  Kowalik, T. F; Limits and patterns of cytomegalovirus genomic diversity in humans; Proceedings of the National Academy of Sciences, U S A; 2015, 112 (30) E4120-E4128

Das Samarendra, Pandey P, Rai A and Mohapatra C; A computational systems biology approach to construct gene regulatory networks for salinity response in rice (Oryza sativa); Indian Journal of Agricultural Sciences; 2015, 85(12): 1546–52

Sengupta D, Guha U, Bhattacharjee S*, Sengupta M*: Association of 12 polymorphic variants conferring genetic risk to lung cancer in Indian population: An extensive meta-analysis. Environ Mol Mutagen. 2017 Dec;58(9):688-700. doi: 10.1002/em.22149. Epub 2017 Oct 27. [*Corresponding Authors]

Chinnaswamy S*, Wardzynska A, Pawelczyk M, Makowska J, Skaaby T, Mercader JM, Ahluwalia TS, Grarup N, Guindo-Martinez M, Bisgaard H, Torrents D, Linneberg A, Bønnelykke K, Kowalski ML. 2017. A functional IFN-λ4-generating DNA polymorphism could protect older asthmatic women from aeroallergen sensitization and associate with clinical features of asthma. Scientific Reports (doi:10.1038/s41598-017-10467-y).

Bhushan A, Ghosh S, Bhattacharjee S and Chinnaswamy S*. 2017. Confounding by single nucleotide polymorphism rs117648444 (P70S) affects the association of interferon lambda locus variants with response to interferon-α-ribavirin therapy in patients with chronic genotype 3 hepatitis C virus infection. Journal of Interferon and Cytokine Research,  37(8): 369-382.

Mukhopadhyay S, Thatoi PK, Pandey AD, Das BK, Ravindran B, Bhattacharjee S , Mohapatra SK. Transcriptomic meta-analysis reveals up-regulation of gene expression functional in osteoclast differentiation in human septic shock. PLoS One. 2017 Feb 15;12(2):e0171689. PMID: 28199355.

Chatterjee S and Majumder PP.Kalyani cohort – the first platform in Eastern India for longitudinal studies on health and disease parameters in peri-urban setting. Global Health, Epidemiology and Genomics (2017), 2, e2, page 1 of 11. doi:10.1017/gheg.2016.19