Banerjee A, Mazumder A, Roy J, Das J, Majumdar A, Chatterjee A, Biswas NK, Chawla Sarkar M, Das S, Dutta S, Maitra A. Emergence of a unique SARS-CoV-2 Delta sub-cluster harboring a constellation of co-appearing non-Spike mutations. J Med Virol. 2023 Jan;95(1):e28413. doi: 10.1002/jmv.28413. PMID: 36541745; PMCID: PMC9878222.
Bharatiya S, Agarwal A, Chinnaswamy S. A Novel Inactive Isoform with a Restored Reading Frame Is Expressed from the Human Interferon Lambda 4 TT Allele at rs368234815. J Interferon Cytokine Res. 2023 Mar 7. doi: 10.1089/jir.2022.0199. Epub ahead of print. PMID: 36880961
Bhattacharjee E, Thiruvengadam R, Ayushi, Das C; GARBH-Ini Team; Wadhwa N, Natchu UCM, Kshetrapal P, Bhatnagar S, Majumder PP, Maitra A. Genetic variants associated with spontaneous preterm birth in women from India: a prospective cohort study. Lancet Reg Health Southeast Asia. 2023 Apr 18;14:100190. doi: 10.1016/j.lansea.2023.100190. PMID: 37492417; PMCID: PMC10363490.
Bhattacharyya C, Barman D, Tripathi D, Dutta S, Bhattacharya C, Alam M, Choudhury P, Devi U, Mahanta J, Rasaily R, Basu A, Paine SK. Influence of Maternal Breast Milk and Vaginal Microbiome on Neonatal Gut Microbiome: a Longitudinal Study during the First Year. Microbiol Spectr. 2023 Jun 15;11(3):e0496722. doi: 10.1128/spectrum.04967-22. Epub 2023 Apr 17. PMID: 37067419; PMCID: PMC10269640.
Chakraborty P, Kurkalang S, Ghatak S, Das S, Palodhi A, Sarkar S, Dhar R, Chenkual S, Pachuau L, Zohmingthanga J, Pautu JL, Zomuana T, Lalruatfela ST, Zothanzama J, Kumar NS, Maitra A. Deep sequencing reveals recurrent somatic mutations and distinct molecular subgroups in gastric cancer in Mizo population, North East India. Genomics. 2023 Nov 13:110741. doi: 10.1016/j.ygeno.2023.110741. Epub ahead of print. PMID: 37967684.
Chakraborty S, Sharma A, Pal S, Sharma A, Sihota R, Bhattacharjee S, Acharya M. A quantitative trait GWAS on lens thickness identifies novel risk loci on PTPRM in the narrow angle individuals susceptible to PACG. Eur J Ophthalmol. 2023 Sep;33(5):1922-1930. doi: 10.1177/11206721231160988. Epub 2023 Mar 17. PMID: 36927043
Chatterjee A, Chaudhary A, Ghosh A, Arun P, Mukherjee G, Arun I, Maitra A, Biswas N, Majumder PP. Overexpression of CD73 is associated with recurrence and poor prognosis of gingivobuccal oral cancer as revealed by transcriptome and deep immune profiling of paired tumor and margin tissues. Cancer Med. 2023 Jul 1. doi: 10.1002/cam4.6299. Epub ahead of print. PMID: 37392167.
Chatterjee S, Das S, Paul P, Chakraborty P, Sarkar S, Das A, Tribedi P. Synergistic interaction of cuminaldehyde and tobramycin: a potential strategy for the efficient management of biofilm caused by Pseudomonas aeruginosa. Folia Microbiol (Praha). 2023 Feb;68(1):151-163. doi: 10.1007/s12223-022-01005-z. Epub 2022 Oct 4. PMID: 36192618.
Das J, Wadhwa N, Natchu UC, Thiruvengadam R, Kshetrapal P, Bhatnagar S, Majumder PP, Maitra A. Genome-wide temporal landscaping of DNA methylation in pregnant women delivering at term: a GARBH-InI study. Epigenomics. 2023 May;15(9):543-556. doi: 10.2217/epi-2023-0145. Epub 2023 Jun 21. PMID: 37345372.
Das S, Biswas NK, Basu A. Mapinsights: deep exploration of quality issues and error profiles in high-throughput sequence data. Nucleic Acids Res. 2023 Aug 11;51(14):e75. doi: 10.1093/nar/gkad539. PMID: 37378434; PMCID: PMC10415152.
Ekhlak M, Kulkarni PP, Singh V, Chaurasia SN, Mohapatra SK, Chaurasia RN, Dash D. Necroptosis executioner MLKL plays pivotal roles in agonist-induced platelet prothrombotic responses and lytic cell death in a temporal order. Cell Death Differ. 2023 Aug;30(8):1886-1899. doi: 10.1038/s41418-023-01181-6. Epub 2023 Jun 10. PMID: 37301927; PMCID: PMC10406901.
GBD 2019 Chronic Respiratory Diseases Collaborators. Global burden of chronic respiratory diseases and risk factors, 1990-2019: an update from the Global Burden of Disease Study 2019. EClinicalMedicine. 2023 May;59:101936. doi: 10.1016/j.eclinm.2023.101936. PMID: 37229504; PMCID: PMC7614570
Ghosh A, Ghosh A, Sinha A, Mathai S, Bhaumik J, Mukhopadhyay A, Maitra A, Biswas NK, Majumder PP, Sengupta S. Identification of HPV16 positive cervical cancer subsets characterized by divergent immune and oncogenic phenotypes with potential implications for immunotherapy. Tumour Biol. 2023;45(1):55-69. doi: 10.3233/TUB-220035. PMID: 37599552
Ghosh S, Mitra P, Saha U, Nandi R, Jena S, Ghosh A, Roy SS, Acharya M, Biswas NK, Singh S. NOTCH pathway inactivation reprograms stem-like oral cancer cells to JAK-STAT dependent state and provides the opportunity of synthetic lethality. Transl Oncol. 2023 Jun;32:101669. doi: 10.1016/j.tranon.2023.101669. Epub 2023 Apr 11. PMID: 37054548; PMCID: PMC10122064.
Gupta N, Chhibber-Goel J, Gupta Y, Mukherjee S, Maitra A, Sharma A, Tandon R. Ocular conjunctival microbiome profiling in dry eye disease: A case control pilot study. Indian J Ophthalmol. 2023 Apr;71(4):1574-1581. doi: 10.4103/ijo.IJO_1756_22. PMID: 37026304; PMCID: PMC10276740.
Hussain M, Mohammed A, Saifi S, Priya S, Sengupta S. Hyper-ubiquitylation of DNA helicase RECQL4 by E3 ligase MITOL prevents mitochondrial entry and potentiates mitophagy. J Biol Chem. 2023 Jul 24:105087. doi: 10.1016/j.jbc.2023.105087. Epub ahead of print. PMID: 37495109
Kar A, Jain D, Kumar S, Rajput K, Pal S, Rana K, Kar R, Jha SK, Medatwal N, Yavvari PS, Pandey N, Mehta D, Sharma H, Bhattacharya D, Pradhan MK, Sharma RD, Srivastava A, Agrawal U, Mukhopadhyay A, Sengupta S, Patil VS, Bajaj A, Dasgupta U. A localized hydrogel-mediated chemotherapy causes immunogenic cell death via activation of ceramide-mediated unfolded protein response. Sci Adv. 2023 Jun 30;9(26):eadf2746. doi: 10.1126/sciadv.adf2746. Epub 2023 Jun 30. PMID: 37390205; PMCID: PMC10313169.
Kumari P, Ghosh S, Acharya S, Mitra P, Roy S, Ghosh S, Maji M, Singh S, Mukherjee A. Cytotoxic Imidazolyl-Mesalazine Ester-Based Ru(II) Complexes Reduce Expression of Stemness Genes and Induce Differentiation of Oral Squamous Cell Carcinoma. J Med Chem. 2023 Oct 26;66(20):14061-14079. doi: 10.1021/acs.jmedchem.3c01092. Epub 2023 Oct 13. PMID: 37831489.
Kurkalang S, Roy S, Acharya A, Mazumder P, Mazumder S, Patra S, Ghosh S, Sarkar S, Kundu S, Biswas NK, Ghose S, Majumder PP, Maitra A. Single-cell transcriptomic analysis of gingivo-buccal oral cancer reveals two dominant cellular programs. Cancer Sci. 2023 Oct 4. doi: 10.1111/cas.15979. Epub ahead of print. PMID: 37792582.
Mondal I, Fatima SW, Priya S, Sengupta S, Khare SK, Kulshreshtha R. Transglutaminase-Polyethyleneimine Nanoflowers Mediated Cellular Delivery of Anti-miR-210 for Effective Glioblastoma Therapy. ACS Biomater Sci Eng. 2023 May 8;9(5):2558-2571. doi: 10.1021/acsbiomaterials.3c00189. Epub 2023 Apr 17. PMID: 37067339.
Mukherjee P, Paul S, Dutta T, Nath S, Ghosh B, Chatterjee D, Mukhopadhyay S, Mukherjee S. Nasal MRSA carriage is a risk factor for development of antibiotic resistance in diabetic foot ulcers and is significantly higher than diabetic and non-diabetic individuals without foot ulcer. BMC Infect Dis. 2023 Oct 26;23(1):729. doi: 10.1186/s12879-023-08673-3. PMID: 37884870; PMCID: PMC10601299.
Nath S, Sarkar M, Maddheshiya A, De D, Paul S, Dey S, Pal K, Roy SK, Ghosh A, Sengupta S, Paine SK, Biswas NK, Basu A, Mukherjee S. Upper respiratory tract microbiome profiles in SARS-CoV-2 Delta and Omicron infected patients exhibit variant specific patterns and robust prediction of disease groups. Microbiol Spectr. 2023 Oct 31:e0236823. doi: 10.1128/spectrum.02368-23. Epub ahead of print. PMID: 37905804.
Panja A, Roy J, Mazumder A, Choudhury SM. Divergent mutations of Delta and Omicron variants: key players behind differential viral attributes across the COVID-19 waves. Virusdisease. 2023 May 10;34(2):1-14. doi: 10.1007/s13337-023-00823-0. Epub ahead of print. PMID: 37363365; PMCID: PMC10171727
Pradhan A, Aneja A, Ghosh S, Devvanshi H, C D, Sahu R, Ross C, Kshetrapal P, Maitra A, Das S. Association of exosomal miR-96-5p and miR-146a-5p with the disease severity in dengue virus infection. J Med Virol. 2023 Mar;95(3):e28614. doi: 10.1002/jmv.28614. PMID: 36840403
Pratap Singh R, Kumari N, Gupta S, Jaiswal R, Mehrotra D, Singh S, Mukherjee S, Kumar R. Intratumoral Microbiota Changes with Tumor Stage and Influences the Immune Signature of Oral Squamous Cell Carcinoma. Microbiol Spectr. 2023 Aug 17;11(4):e0459622. doi: 10.1128/spectrum.04596-22. Epub 2023 Jul 6. PMID: 37409975; PMCID: PMC10434029.
Roy DG, Singh L, Chaturvedi HK, Chinnaswamy S. Gender-dependent multiple cross-phenotype association of interferon lambda genetic variants with peripheral blood profiles in healthy individuals. Mol Genet Genomic Med. 2023 Oct 5:e2292. doi: 10.1002/mgg3.2292. Epub ahead of print. PMID: 37795763.
Roy S, Roy M, Nath S, Chaudhuri SJ, Ghosh MK, Mukherjee S, Chatterjee M. Role of molecular approaches to distinguish post kala-azar dermal leishmaniasis from leprosy: A case study. Indian J Dermatol Venereol Leprol. 2023 Jan-Mar;89(2):298-300. doi: 10.25259/IJDVL_415_2022. PMID: 36461804.
Roy VL, Majumder PP. Genomic associations with antibody response to an oral cholera vaccine. Vaccine. 2023 Oct 6;41(42):6391-6400. doi: 10.1016/j.vaccine.2023.09.016. Epub 2023 Sep 10. PMID: 37699782.
Roy AN, Gupta AM, Banerjee D, Chakrabarti J, Raghavendra PB. Unraveling DPP4 Receptor Interactions with SARS-CoV-2 Variants and MERS-CoV: Insights into Pulmonary Disorders via Immunoinformatics and Molecular Dynamics. Viruses. 2023 Oct 6;15(10):2056. doi: 10.3390/v15102056. PMID: 37896834; PMCID: PMC10612102.
Sanga S, Chakraborty S, Bardhan M, Polavarapu K, Kumar VP, Bhattacharya C, Nashi S, Vengalil S, Geetha TS, Ramprasad V, Nalini A, Basu A, Acharya M. Identification of a shared, common haplotype segregating with an SGCB c.544 T > G mutation in Indian patients affected with sarcoglycanopathy. Sci Rep. 2023 Sep 12;13(1):15095. doi: 10.1038/s41598-023-41487-6. PMID: 37699968; PMCID: PMC10497502.
Sengupta D, Mukhopadhyay P, Banerjee S, Ganguly K, Mascharak P, Mukherjee N, Mitra S, Bhattacharjee S, Mitra R, Sarkar A, Chaudhuri T, Bhattacharjee G, Nath S, Roychoudhury S, Sengupta M. Identifying polymorphic cis-regulatory variants as risk markers for lung carcinogenesis and chemotherapy responses in tobacco smokers from eastern India. Sci Rep. 2023 Mar 10;13(1):4019. doi: 10.1038/s41598-023-30962-9. PMID: 36899086; PMCID: PMC10006236.
Srivastava K, Pandit B. Genome-wide CRISPR screens and their applications in infectious disease. Front Genome Ed. 2023 Sep 19;5:1243731. doi: 10.3389/fgeed.2023.1243731. PMID: 37794981; PMCID: PMC10546192.